DeepARG consists of two deep learning models designed to predict Antibiotic Resistance in Metagenomes. DeepARG-SS is designed for analyzing short read sequences from Next Generation sequencing technologies such as Illumina. On the other hand, DeepARG-LS is designed for analyzing long sequence reads such as full genes or open reading frames (e.g., substracted from large contigs).
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amr, antibiotic-resistance, antimicrobial-resistance, arg, deeparg, deep-learning, metagenomics, prediction