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Description

The Immcantation framework provide a start-to-finish set of analytical methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) data. Python and R packages are provided for raw read processing, population structure determination, lineage reconstruction, genotyping, and broad repertoire analysis.

Repository

https://bitbucket.org/kleinstein/immcantation

Last Built

1 week, 3 days ago passed

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Tags

repertoire sequencing, BCR, B cell repertoire analysis, adaptive immune receptor repertoires, adaptive immunity, immunology, TCR, AIRR-Seq, Rep-Seq, bioinformatics, immunoglobulin, repertoire analysis

Project Privacy Level

Public

Short URLs

immcantation.readthedocs.io
immcantation.rtfd.io

Default Version

version-1.8.0

'latest' Version

default