Versions
Description
This is a lightweight protocol for assembling up to a few hundred million mRNAseq reads, annotating the resulting assembly, and doing differential expression analysis. The input is short-insert paired-end Illumina reads. This protocol can be run in a single command because it uses the snakemake automated workflow management system.
Repository
https://github.com/dib-lab/2018-snakemake-eel-pond
Project Slug
2018-snakemake-eel-pond
Last Built
3 years, 7 months ago failed
Maintainers
Home Page
https://github.com/dib-lab/2018-snakemake-eel-pond
Badge
Tags
automated, nonmodel, pipeline, rnaseq, transcriptome
Short URLs
2018-snakemake-eel-pond.readthedocs.io
2018-snakemake-eel-pond.rtfd.io
Default Version
latest
'latest' Version
master
