Versions
Description
SIDR (pronounced: cider) is a tool to filter Next Generation Sequencing (NGS) data based on a chosen target organism. SIDR uses data fron BLAST (or similar classifiers) to train a decision tree model to classify sequence data as either belonging to the target organism, or belonging to something else. This classification can be used to filter the data for later assembly.
Repository
https://github.com/damurdock/SIDR.git
Project Slug
sidr
Last Built
5 years, 8 months ago passed
Maintainers
Home Page
https://github.com/damurdock/SIDR
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Tags
bioinformatics, machine-learning, python
Short URLs
sidr.readthedocs.io
sidr.rtfd.io
Default Version
latest
'latest' Version
master
