Welcome!¶

$ rasdump JAN12_CHINAFISH_LZ_003.RAS
Writing channel 0 () to JAN12_CHINAFISH_LZ_00_.csv
Channel 0 () is empty, skipping
Writing channel 1 () to JAN12_CHINAFISH_LZ_01_.csv
Writing channel 2 () to JAN12_CHINAFISH_LZ_02_.csv
Writing channel 3 () to JAN12_CHINAFISH_LZ_03_.csv
Writing channel 4 () to JAN12_CHINAFISH_LZ_04_.csv
Writing channel 5 () to JAN12_CHINAFISH_LZ_05_.csv
Writing channel 6 () to JAN12_CHINAFISH_LZ_06_.csv
Writing channel 7 () to JAN12_CHINAFISH_LZ_07_.csv
Writing channel 8 () to JAN12_CHINAFISH_LZ_08_.csv
Writing channel 9 () to JAN12_CHINAFISH_LZ_09_.csv
Writing channel 10 () to JAN12_CHINAFISH_LZ_10_.csv
Writing channel 11 () to JAN12_CHINAFISH_LZ_11_.csv
Writing channel 12 () to JAN12_CHINAFISH_LZ_12_.csv
Writing channel 13 () to JAN12_CHINAFISH_LZ_13_.csv
Writing channel 14 () to JAN12_CHINAFISH_LZ_14_.csv
Writing channel 15 () to JAN12_CHINAFISH_LZ_15_.csv

$ rasextract JAN12_CHINAFISH_LZ_003.RAS
Writing channel 0 () to JAN12_CHINAFISH_LZ_00_.png
Channel 0 () is empty, skipping
Writing channel 1 () to JAN12_CHINAFISH_LZ_01_.png
Writing channel 2 () to JAN12_CHINAFISH_LZ_02_.png
Writing channel 3 () to JAN12_CHINAFISH_LZ_03_.png
Writing channel 4 () to JAN12_CHINAFISH_LZ_04_.png
Writing channel 5 () to JAN12_CHINAFISH_LZ_05_.png
Writing channel 6 () to JAN12_CHINAFISH_LZ_06_.png
Channel 6 () has no values below 30
Writing channel 7 () to JAN12_CHINAFISH_LZ_07_.png
Writing channel 8 () to JAN12_CHINAFISH_LZ_08_.png
Writing channel 9 () to JAN12_CHINAFISH_LZ_09_.png
Writing channel 10 () to JAN12_CHINAFISH_LZ_10_.png
Writing channel 11 () to JAN12_CHINAFISH_LZ_11_.png
Writing channel 12 () to JAN12_CHINAFISH_LZ_12_.png
Writing channel 13 () to JAN12_CHINAFISH_LZ_13_.png
Channel 13 () has no values below 62
Writing channel 14 () to JAN12_CHINAFISH_LZ_14_.png
Writing channel 15 () to JAN12_CHINAFISH_LZ_15_.png
Channel 15 () has no values below 1522

$ rasextract -a -C 0,15,0,15 -c jet -p 95 JAN12_CHINAFISH_HZ_001.RAS channels.txt
File contains 16 channels, extracting channels 1,2,3,4,5,6,7,8,9,10,11,12,13,14
Writing channel 1 (Cu) to JAN12_CHINAFISH_HZ_01_Cu.png
Writing channel 2 (Zn) to JAN12_CHINAFISH_HZ_02_Zn.png
Writing channel 3 (Pbli) to JAN12_CHINAFISH_HZ_03_Pbli.png
Writing channel 4 (Pbla) to JAN12_CHINAFISH_HZ_04_Pbla.png
Writing channel 5 (Pblb) to JAN12_CHINAFISH_HZ_05_Pblb.png
Writing channel 6 (Ca) to JAN12_CHINAFISH_HZ_06_Ca.png
Writing channel 7 (Br) to JAN12_CHINAFISH_HZ_07_Br.png
Writing channel 8 (Mn) to JAN12_CHINAFISH_HZ_08_Mn.png
Writing channel 9 (Fe) to JAN12_CHINAFISH_HZ_09_Fe.png
Writing channel 10 (Tika) to JAN12_CHINAFISH_HZ_10_Tika.png
Writing channel 11 (Tikb) to JAN12_CHINAFISH_HZ_11_Tikb.png
Writing channel 12 (ES) to JAN12_CHINAFISH_HZ_12_ES.png
Writing channel 13 (ICR) to JAN12_CHINAFISH_HZ_13_ICR.png
Writing channel 14 (Ni) to JAN12_CHINAFISH_HZ_14_Ni.png

$ rasextract --help-formats
The following file formats are available:

.bmp
.eps
.gif
.jpeg
.jpg
.pdf
.png
.ps
.svg
.svgz
.tif
.tiff
.xcf

$ rasinfo -t JAN12_CHINAFISH_LZ_003.RAS
{rasfile}=JAN12_CHINAFISH_LZ_003.RAS
{filename}=JAN12_CHINAFISH_LZ_003.RAS
{filename_root}=JAN12_CHINAFISH_LZ
{version_name}=Raster Scan V.0.1
{version_number}=1
{pid}=0
{x_motor}=HORZ
{y_motor}=VERT
{region_filename}=TEST.RGN
{start_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:34:08
{stop_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:43:07
{channel_count}=16
{point_count}=240
{raster_count}=301
{count_time}=0.004690
{sweep_count}=1
{ascii_output}=1
{pixels_per_point}=1
{scan_direction}=2
{scan_type}=1
{current_x_direction}=-1
{run_number}=3

{channel:%02d}=00
{channel_name}=
{channel_enabled}=True

{channel:%02d}=01
{channel_name}=
{channel_enabled}=True
...

$ rasextract -o "{start_time:%Y-%m-%d}_{channel:02d}.tiff" JAN12_CHINAFISH_LZ_003.RAS channels.txt
Writing channel 1 (Al) to 2012-01-17_01.tiff
Writing channel 2 (Si) to 2012-01-17_02.tiff
Writing channel 3 (P) to 2012-01-17_03.tiff
Writing channel 4 (S) to 2012-01-17_04.tiff
Writing channel 5 (Cl) to 2012-01-17_05.tiff
Writing channel 6 (ES) to 2012-01-17_06.tiff
Writing channel 7 (Ca) to 2012-01-17_07.tiff
Writing channel 9 (HHH) to 2012-01-17_09.tiff
Writing channel 10 (Cr) to 2012-01-17_10.tiff

{filename_root} - Channel {channel} ({channel_name})\n{start_time:%A, %d %b %Y}\n{percentile:g}th Percentile

$ for pct in 100 99.9 99 95 90
> do rasextract -p $pct -a -o "fish_C{channel:02d}_P{percentile}.tiff" -t "Channel {channel} - {channel_name}\n{percentile:g}th Percentile" JAN12_CHINAFISH_LZ_003.RAS channels.txt
> done
Writing channel 1 (Al) to fish_C01_P100.0.tiff
Writing channel 2 (Si) to fish_C02_P100.0.tiff
Writing channel 3 (P) to fish_C03_P100.0.tiff
Writing channel 4 (S) to fish_C04_P100.0.tiff
Writing channel 5 (Cl) to fish_C05_P100.0.tiff
Writing channel 6 (ES) to fish_C06_P100.0.tiff
Writing channel 7 (Ca) to fish_C07_P100.0.tiff
Writing channel 9 (HHH) to fish_C09_P100.0.tiff
Writing channel 10 (Cr) to fish_C10_P100.0.tiff
Writing channel 1 (Al) to fish_C01_P99.9.tiff
Writing channel 2 (Si) to fish_C02_P99.9.tiff
Writing channel 3 (P) to fish_C03_P99.9.tiff
Writing channel 4 (S) to fish_C04_P99.9.tiff
Writing channel 5 (Cl) to fish_C05_P99.9.tiff
Writing channel 6 (ES) to fish_C06_P99.9.tiff
Writing channel 7 (Ca) to fish_C07_P99.9.tiff
Writing channel 9 (HHH) to fish_C09_P99.9.tiff
Writing channel 10 (Cr) to fish_C10_P99.9.tiff
Writing channel 1 (Al) to fish_C01_P99.0.tiff
Writing channel 2 (Si) to fish_C02_P99.0.tiff
Writing channel 3 (P) to fish_C03_P99.0.tiff
Writing channel 4 (S) to fish_C04_P99.0.tiff
Writing channel 5 (Cl) to fish_C05_P99.0.tiff
Writing channel 6 (ES) to fish_C06_P99.0.tiff
Writing channel 7 (Ca) to fish_C07_P99.0.tiff
Writing channel 9 (HHH) to fish_C09_P99.0.tiff
Writing channel 10 (Cr) to fish_C10_P99.0.tiff
Writing channel 1 (Al) to fish_C01_P95.0.tiff
Writing channel 2 (Si) to fish_C02_P95.0.tiff
Writing channel 3 (P) to fish_C03_P95.0.tiff
Writing channel 4 (S) to fish_C04_P95.0.tiff
Writing channel 5 (Cl) to fish_C05_P95.0.tiff
Writing channel 6 (ES) to fish_C06_P95.0.tiff
Writing channel 7 (Ca) to fish_C07_P95.0.tiff
Writing channel 9 (HHH) to fish_C09_P95.0.tiff
Writing channel 10 (Cr) to fish_C10_P95.0.tiff
Writing channel 1 (Al) to fish_C01_P90.0.tiff
Writing channel 2 (Si) to fish_C02_P90.0.tiff
Writing channel 3 (P) to fish_C03_P90.0.tiff
Writing channel 4 (S) to fish_C04_P90.0.tiff
Writing channel 5 (Cl) to fish_C05_P90.0.tiff
Writing channel 6 (ES) to fish_C06_P90.0.tiff
Writing channel 7 (Ca) to fish_C07_P90.0.tiff
Writing channel 9 (HHH) to fish_C09_P90.0.tiff
Writing channel 10 (Cr) to fish_C10_P90.0.tiff

$ rasinfo -r JAN12_AMNHBIRD_HZ_004.RAS
File name:              JAN12_AMNHBIRD_HZ_004.RAS
Original filename:      JAN12_AMNHBIRD_HZ_004.RAS
Original filename root: JAN12_AMNHBIRD_HZ
Version name:           Raster Scan V.0.1
Version number:         1
PID:                    0
X-Motor name:           HORZ
Y-Motor name:           VERT
Region filename:        TEST.RGN
Start time:             Tuesday, 17 January 2012, 07:06:05
Stop time:              Tuesday, 17 January 2012, 13:00:33
Channel count:          16
Channel resolution:     3400 x 1301
Count time:             0.003987
Sweep count:            1
Produce ASCII output:   1 (Yes)
Pixels per point:       1
Scan direction:         2 (+ve and -ve)
Scan type:              1 (Quick scan)
Current X-direction:    -1
Run number:             4
Channel  0 range:       0-0 (empty)
Channel  1 range:       0-2449
Channel  2 range:       0-1159
Channel  3 range:       0-907
Channel  4 range:       0-944
Channel  5 range:       0-900
Channel  6 range:       0-1507
Channel  7 range:       0-328
Channel  8 range:       0-349
Channel  9 range:       0-432
Channel 10 range:       0-359
Channel 11 range:       0-394
Channel 12 range:       0-270
Channel 13 range:       0-3989
Channel 14 range:       0-222
Channel 15 range:       0-1372

Comments:
The comment line always goes in speech marks
like this
and this
line 4
line 5
and the final line

$ rasinfo --templates JAN12_CHINAFISH_LZ_003.RAS
{rasfile}=JAN12_CHINAFISH_LZ_003.RAS
{filename}=JAN12_CHINAFISH_LZ_003.RAS
{filename_root}=JAN12_CHINAFISH_LZ
{version_name}=Raster Scan V.0.1
{version_number}=1
{pid}=0
{x_motor}=HORZ
{y_motor}=VERT
{region_filename}=TEST.RGN
{start_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:34:08
{stop_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:43:07
{channel_count}=16
{point_count}=240(sandbox)dave@morpheus:~/Desktop/Beamline/Beamline 6-2/data/data sorted by sample/china fish/maps/LZ/RAS files$ rasinfo --templates JAN12_CHINAFISH_LZ_003.RAS
{rasfile}=JAN12_CHINAFISH_LZ_003.RAS
{filename}=JAN12_CHINAFISH_LZ_003.RAS
{filename_root}=JAN12_CHINAFISH_LZ
{version_name}=Raster Scan V.0.1
{version_number}=1
{pid}=0
{x_motor}=HORZ
{y_motor}=VERT
{region_filename}=TEST.RGN
{start_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:34:08
{stop_time:%Y-%m-%d %H:%M:%S}=2012-01-17 21:43:07
{channel_count}=16
{point_count}=240
{raster_count}=301
{count_time}=0.004690
{sweep_count}=1
{ascii_output}=1
{pixels_per_point}=1
{scan_direction}=2
{scan_type}=1
{current_x_direction}=-1
{run_number}=3

{channel:%02d}=00
{channel_name}=
{channel_enabled}=True

{channel:%02d}=01
{channel_name}=
{channel_enabled}=True

{channel:%02d}=02
{channel_name}=
{channel_enabled}=True


{raster_count}=301
{count_time}=0.004690
{sweep_count}=1
{ascii_output}=1
{pixels_per_point}=1
{scan_direction}=2
{scan_type}=1
{current_x_direction}=-1
{run_number}=3

{channel:%02d}=00
{channel_name}=
{channel_enabled}=True

{channel:%02d}=01
{channel_name}=
{channel_enabled}=True

{channel:%02d}=02
{channel_name}=
{channel_enabled}=True
...