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Description

The Immcantation framework provide a start-to-finish set of analytical methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) data. Python and R packages are provided for raw read processing, population structure determination, lineage reconstruction, genotyping, and broad repertoire analysis.

Repository

https://bitbucket.org/kleinstein/immcantation

Project Slug

immcantation

Last Built

2 weeks, 3 days ago passed

Maintainers

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Tags

bioinformatics, immunology, immunoglobulin, rep-seq, adaptive-immunity, airr-seq, tcr, bcr, repertoire-sequencing, adaptive-immune-receptor-repertoires, b-cell-repertoire-analysis, repertoire-analysis

Project Privacy Level

Public

Short URLs

immcantation.readthedocs.io
immcantation.rtfd.io

Default Version

stable

'latest' Version

default