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Description

The Immcantation framework provide a start-to-finish set of analytical methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) data. Python and R packages are provided for raw read processing, population structure determination, lineage reconstruction, genotyping, and broad repertoire analysis.

Repository

https://bitbucket.org/kleinstein/immcantation

Last Built

3 days, 12 hours ago passed

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Tags

bioinformatics, immunology, AIRR-Seq, TCR, Rep-Seq, BCR, immunoglobulin, repertoire analysis, repertoire sequencing, B cell repertoire analysis, adaptive immunity, adaptive immune receptor repertoires

Project Privacy Level

Public

Short URLs

immcantation.readthedocs.io
immcantation.rtfd.io

Default Version

version-2.1.0

'latest' Version

default