Versions

Description

HemTools is specifically designed to help people in the Hematology Department at Stjude to perform common NGS analyses, including ChIP-seq, ATAC-seq, CUT & RUN, CRISPR-seq, etc. Most HemTools' APIs (Application Programming Interface) are free of installation; users can directly execute the APIs without any software configuration. For input files preparation, HemTools can automatically prepare/guess the inputs by parsing the data files in the current directory. Moreover, HemTools will notify users when jobs are done and send emails with a visually-appealing report and a link to the Protein Paint genome browser at Stjude. HemTools is maintained by Yichao Li and Yong Cheng. The documentation is available at https://hemtools.readthedocs.io

Repository

https://github.com/YichaoOU/HemTools.git

Project Slug

hemtools

Last Built

2 days, 9 hours ago passed

Maintainers

Home Page

https://github.com/YichaoOU/HemTools

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Tags

python, bioinformatics, bash, rna-seq, r, next-generation-sequencing, data-visualization, atac-seq, chip-seq, cut-run, crispr-seq, pipline

Short URLs

hemtools.readthedocs.io
hemtools.rtfd.io

Default Version

latest

'latest' Version

master