Empirical
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Functions for analyzing with generic sequence types. More...
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Namespaces | |
emp | |
If we are in emscripten, make sure to include the header. | |
Functions | |
template<typename TYPE > | |
size_t | emp::calc_hamming_distance (const TYPE &in1, const TYPE &in2, int offset=0) |
template<typename TYPE > | |
size_t | emp::calc_edit_distance (const TYPE &in1, const TYPE &in2) |
template<typename TYPE , typename GAP_TYPE > | |
size_t | emp::align (TYPE &in1, TYPE &in2, GAP_TYPE gap) |
Functions for analyzing with generic sequence types.
A set of functions for analyzing sequences, including distance metrics (Hamming and Edit/Levenschtein) and alignment.