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Description

CNVkit is a flexible toolkit for calling copy number from DNA sequencing data. For whole-exome and targeted gene panels, off-target sequencing reads from hybrid capture are used to improve copy number estimates. Targeted amplicon capture and whole-genome sequencing protocols are also supported. CNVKit implements a variety of visualization modes, analysis methods, and output file formats for easy integration into existing pipelines.

Repository

http://github.com/etal/cnvkit.git

Last Built

1 week, 4 days ago passed

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Home Page

http://github.com/etal/cnvkit.git

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Tags

ngs, sequencing, bionformatics

Project Privacy Level

Public

Short URLs

cnvkit.readthedocs.io
cnvkit.rtfd.io

Default Version

stable

'latest' Version

master